STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g11419Putative ARM-like repeat-containing protein. (468 aa)    
Predicted Functional Partners:
AYI70_g6552
60S ribosomal protein L5.
    
 
 0.939
AYI70_g3654
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.900
AYI70_g6948
Ribosome assembly protein rrb1.
   
  
 0.853
AYI70_g11330
Suppressor of SWI4 1-like protein.
   
    0.844
AYI70_g5463
U3 small nucleolar RNA-associated protein 5.
   
    0.821
AYI70_g11275
Ribosome production factor 2-like protein.
   
 
 0.815
AYI70_g2521
Ribosome production factor 2-like protein.
   
 
 0.815
AYI70_g1901
25S rRNA (Cytosine-C(5))-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.813
AYI70_g2057
U3 small nucleolar RNA-associated protein 21-like protein.
   
    0.807
AYI70_g1494
Ribosomal RNA-processing protein 12.
   
  
 0.807
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.