STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g11116U1 small nuclear ribonucleoprotein 70 kDa. (305 aa)    
Predicted Functional Partners:
AYI70_g1902
Putative small nuclear ribonucleoprotein Sm D1.
   
 0.989
AYI70_g11127
Nuclear cap-binding protein subunit 2.
    
 0.986
AYI70_g11594
Small nuclear ribonucleoprotein-associated protein B.
   
 0.984
AYI70_g8018
Uncharacterized protein.
   
 0.972
AYI70_g4870
Uncharacterized protein.
   
 0.972
AYI70_g925
RNA-binding protein 25.
   
 
 0.967
AYI70_g428
Splicing factor 3B subunit 2.
   
 0.966
AYI70_g5723
U2 small nuclear ribonucleoprotein B.
   
 0.964
AYI70_g690
U1 small nuclear ribonucleoprotein.
   
 0.964
AYI70_g422
U2 small nuclear ribonucleoprotein A.
   
 
 0.964
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.