STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g10887Uncharacterized protein. (524 aa)    
Predicted Functional Partners:
AYI70_g1902
Putative small nuclear ribonucleoprotein Sm D1.
    
 0.764
AYI70_g12095
DNA polymerase delta small subunit.
    
 0.743
AYI70_g1884
DNA polymerase delta small subunit.
    
 0.743
AYI70_g3711
BRCA1-associated RING domain protein 1.
   
 0.740
AYI70_g10045
Protein Notchless.
   
 
 0.720
AYI70_g9147
Notchless protein-like protein.
   
 
 0.720
AYI70_g11901
DNA polymerase.
   
 0.719
AYI70_g10572
Crossover junction endonuclease mus81.
    
 0.719
AYI70_g4875
Crossover junction endonuclease mus81.
    
 0.719
AYI70_g2999
DNA polymerase.
   
 0.719
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.