STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g10758RNA-directed DNA polymerase from mobile element jockey. (329 aa)    
Predicted Functional Partners:
AYI70_g9334
Intersectin-2.
    
  0.690
AYI70_g3711
BRCA1-associated RING domain protein 1.
    
 0.682
AYI70_g11766
Ankyrin repeat protein nuc-2.
    
 0.603
AYI70_g5371
60S ribosomal protein L21-A.
   
   0.577
AYI70_g9542
Glycerophosphodiester phosphodiesterase gde1.
    
  0.574
AYI70_g3355
Glycerophosphodiester phosphodiesterase gde1.
    
  0.574
AYI70_g12416
Cytochrome b mRNA maturase bI2.
    
 0.531
AYI70_g1355
Mitochondrial import receptor subunit TOM40.
    
  0.506
AYI70_g607
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
  0.502
AYI70_g5306
Double-strand break repair protein MRE11A.
    
  0.486
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.