STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g10290Protein CMSS1. (188 aa)    
Predicted Functional Partners:
AYI70_g896
Protein LTV1-like protein.
   
    0.644
AYI70_g2057
U3 small nucleolar RNA-associated protein 21-like protein.
   
   0.612
AYI70_g2199
Putative RNA-binding protein.
   
    0.590
AYI70_g12107
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.566
AYI70_g11553
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.566
AYI70_g6736
Uncharacterized protein.
   
    0.566
AYI70_g4126
Pre-rRNA-processing protein esf1.
   
    0.565
AYI70_g3502
ATP-dependent RNA helicase ROK1; Belongs to the DEAD box helicase family.
   
  
 0.536
AYI70_g12066
Sas10 domain-containing protein.
   
    0.532
AYI70_g3376
Ribosome biogenesis protein enp2-like protein.
   
  
 0.529
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.