STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g10133DNA cross-link repair protein pso2/snm1. (515 aa)    
Predicted Functional Partners:
AYI70_g8277
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.948
AYI70_g5704
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.933
AYI70_g4057
Integrator complex subunit 4-like protein.
   
 0.928
AYI70_g5377
Pre-mRNA polyadenylation factor FIP1.
    
 0.927
AYI70_g10786
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.887
AYI70_g1675
Symplekin.
   
 0.886
AYI70_g316
Symplekin.
   
 0.886
AYI70_g1037
Cleavage stimulation factor subunit 1.
   
 0.882
AYI70_g11517
Integrator complex subunit 3.
    
 0.853
AYI70_g1620
Uncharacterized protein.
    
 0.843
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.