STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g1173WD repeat-containing protein 82. (93 aa)    
Predicted Functional Partners:
AYI70_g10786
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.978
AYI70_g2930
Endoribonuclease ysh1.
   
 0.976
AYI70_g5518
Pre-mRNA 3' end processing protein WDR33.
   
 0.974
AYI70_g2994
Cleavage and polyadenylation specificity factor subunit 4.
    
 0.974
AYI70_g8277
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.973
AYI70_g5377
Pre-mRNA polyadenylation factor FIP1.
   
 0.973
AYI70_g6337
Histone-lysine N-methyltransferase SETD1.
   
 
 0.933
AYI70_g11719
Set1/Ash2 histone methyltransferase complex subunit ASH2.
   
 
 0.916
AYI70_g5704
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.912
AYI70_g6134
Cleavage stimulation factor subunit 2.
    
 
 0.911
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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