STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g9422Ubiquitin-like modifier-activating enzyme ATG7. (691 aa)    
Predicted Functional Partners:
AYI70_g9110
Autophagy-related protein.
   
 0.986
AYI70_g11947
Autophagy-related protein 3.
    
 0.982
AYI70_g2951
NEDD8-conjugating enzyme ubc12; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.881
AYI69_g2437
Putative small nuclear ribonucleoprotein F.
   
 0.843
AYI70_g1435
Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.837
AYI70_g889
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.825
AYI70_g9432
Polyubiquitin.
   
 0.813
AYI70_g7061
Putative WD repeat-containing protein.
     
 0.810
AYI70_g10912
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
    
 0.807
AYI70_g5099
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
    
 0.807
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.