STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g9260Threonine-tRNA ligase, cytoplasmic. (732 aa)    
Predicted Functional Partners:
AYI70_g659
Tyrosine--tRNA ligase.
  
 
 0.741
AYI70_g3476
Translation initiation factor IF-2, mitochondrial.
  
 0.689
AYI70_g2299
54S ribosomal protein L10, mitochondrial.
   
 
 0.685
AYI69_g11002
Putative 37S ribosomal protein mrp2, mitochondrial.
   
 
 0.647
AYI70_g4371
Putative 37S ribosomal protein S28, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.644
AYI70_g8988
50S ribosomal protein L3-2, chloroplastic.
   
 
 0.633
AYI70_g4572
54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.633
AYI70_g10867
50S ribosomal protein L1.
   
 
 0.631
AYI70_g4548
30S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.593
AYI70_g5555
28S ribosomal protein S6, mitochondrial.
   
 
 0.579
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.