STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g9162Protein transport protein sec22; Belongs to the synaptobrevin family. (90 aa)    
Predicted Functional Partners:
AYI70_g250
Synaptobrevin-like protein; Belongs to the synaptobrevin family.
    
 0.990
AYI70_g73
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.987
AYI70_g3223
Protein sly1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.985
AYI70_g87
Syntaxin pep12; Belongs to the syntaxin family.
    
 0.985
AYI70_g336
Uncharacterized protein.
   
 0.981
AYI70_g3612
Vesicle transport protein USE1.
    
 0.964
AYI70_g6288
Uncharacterized protein.
    
 0.962
AYI70_g1859
Putative syntaxin-8B.
    
 0.957
AYI70_g5302
Syntaxin-10; Belongs to the syntaxin family.
    
 0.919
AYI70_g2073
Syntaxin-10; Belongs to the syntaxin family.
    
 0.919
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.