STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g8885Protein ZBED8. (331 aa)    
Predicted Functional Partners:
AYI70_g12319
Histone-binding protein RBBP4.
    
 0.872
AYI70_g12254
Histone-binding protein RBBP4.
    
 0.872
AYI70_g1330
ATP-dependent DNA helicase MPH1.
    
 0.851
AYI69_g2437
Putative small nuclear ribonucleoprotein F.
    
 0.847
AYI69_g4659
Histone H3; Belongs to the histone H3 family.
    
 0.832
AYI70_g3711
BRCA1-associated RING domain protein 1.
    
 0.813
AYI70_g9432
Polyubiquitin.
    
 0.796
AYI70_g3721
DNA-directed RNA polymerase II subunit RPB1.
    
 0.792
AYI70_g10377
Histone H2A; Belongs to the histone H2A family.
    
 0.788
AYI70_g5982
Uncharacterized protein.
    
 0.781
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.