STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g8625Sorting nexin-4. (482 aa)    
Predicted Functional Partners:
AYI70_g7567
Sorting nexin-41.
    
 0.894
AYI70_g4232
Sorting nexin-41.
    
 0.894
AYI70_g3359
Sorting nexin-41.
    
 0.894
AYI70_g1763
Vacuolar protein sorting-associated protein 35.
   
 
 0.763
AYI70_g2653
Vacuolar protein sorting-associated protein 26B-like.
    
 
 0.755
AYI70_g294
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.691
AYI70_g1406
Putative inositol polyphosphate 5-phosphatase.
  
  
 0.670
AYI70_g3485
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.644
AYI70_g1145
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.627
AYI70_g1171
AP-1 complex subunit gamma.
     
 0.626
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.