STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g8154Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
AYI70_g10305
ATP-dependent RNA helicase FAL1.
    
 0.914
AYI70_g3013
PWI domain-containing protein.
   
 0.837
AYI70_g2881
PWI domain-containing protein.
   
 0.837
AYI70_g10939
Serine/threonine-protein kinase prp4.
   
  0.773
AYI70_g10899
Serine/threonine-protein kinase prp4.
   
  0.773
AYI70_g11154
Regulator of nonsense transcripts UPF3.
   
 
 0.769
AYI70_g693
Regulator of nonsense transcripts UPF3.
   
 
 0.769
AYI70_g12270
Aly/REF export factor 2.
     
 0.709
AYI70_g9903
Aly/REF export factor 2.
     
 0.709
AYI70_g925
RNA-binding protein 25.
   
 
  0.700
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.