STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g7707Suppressor of glycerol defect protein 1. (465 aa)    
Predicted Functional Partners:
AYI70_g1781
RNA helicase.
   
 
 0.930
AYI70_g6080
WD repeat-containing protein 3.
   
   0.924
AYI70_g7072
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.915
AYI70_g12066
Sas10 domain-containing protein.
   
 
 0.909
AYI70_g4034
Neuroguidin.
   
   0.908
AYI70_g11758
U3 small nucleolar RNA-interacting protein 2.
   
   0.905
AYI70_g4126
Pre-rRNA-processing protein esf1.
   
   0.905
AYI70_g10305
ATP-dependent RNA helicase FAL1.
   
 
 0.887
AYI70_g3088
U3 small nucleolar RNA-associated protein 18-like protein.
   
   0.884
AYI70_g9184
PIN2/TERF1-interacting telomerase inhibitor 1.
   
   0.868
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.