STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g7693UPF0187 protein. (259 aa)    
Predicted Functional Partners:
AYI70_g9432
Polyubiquitin.
   
 0.902
AYI70_g11042
Ubiquitin-conjugating enzyme spm2.
   
 0.849
AYI70_g237
BRCT-containing protein 1.
    
 0.830
AYI70_g6480
2-oxoglutarate dehydrogenase, mitochondrial.
    
 
 0.803
AYI70_g5811
Putative 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial.
    
 
 0.803
AYI70_g736
Uncharacterized protein.
    
 0.803
AYI70_g5995
Ubiquitin-60S ribosomal protein L40.
    
  0.792
AYI69_g10355
Ubiquitin-40S ribosomal protein S27a.
    
  0.792
AYI70_g3711
BRCA1-associated RING domain protein 1.
   
 0.789
AYI70_g1610
Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.763
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.