STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g7482Bromodomain-containing protein 9. (738 aa)    
Predicted Functional Partners:
AYI70_g11772
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.872
AYI70_g6019
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.872
AYI70_g2676
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.872
AYI69_g4659
Histone H3; Belongs to the histone H3 family.
    
 0.727
AYI70_g389
Chromatin remodeling factor mit1.
    
 0.624
AYI70_g10864
Histone deacetylase RPD3.
    
 0.549
AYI70_g8506
Histone deacetylase 1.
    
 0.549
AYI70_g2770
Histone deacetylase RPD3.
    
 0.549
AYI70_g12319
Histone-binding protein RBBP4.
   
 
  0.513
AYI70_g12254
Histone-binding protein RBBP4.
   
 
  0.513
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.