STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g6871Peptidyl-tRNA hydrolase 2, mitochondrial. (185 aa)    
Predicted Functional Partners:
AYI70_g3703
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
  0.699
AYI70_g12251
Ubiquitin carboxyl-terminal hydrolase 30-like protein; Belongs to the peptidase C19 family.
    
  0.662
AYI70_g6517
USP domain-containing protein; Belongs to the peptidase C19 family.
    
  0.662
AYI70_g3112
Ubiquitin carboxyl-terminal hydrolase 30; Belongs to the peptidase C19 family.
    
  0.662
AYI70_g2959
Ubiquitin carboxyl-terminal hydrolase 30-like protein; Belongs to the peptidase C19 family.
    
  0.662
AYI70_g7310
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.660
AYI70_g4600
Mitochondrial Rho GTPase.
    
  0.654
AYI70_g6717
Mitochondrial outer membrane protein porin.
   
 
  0.644
AYI70_g11813
Mitochondrial import receptor subunit tom20.
   
 
 0.631
AYI70_g1698
Mitochondrial import receptor subunit tom20.
   
 
 0.631
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.