STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g6753ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. (563 aa)    
Predicted Functional Partners:
AYI70_g5279
Enhancer of mRNA-decapping protein 3.
    
 0.999
AYI70_g1978
mRNA-decapping enzyme 1B.
   
 0.999
AYI70_g1484
Uncharacterized protein.
    
 0.999
AYI70_g4
Sm-like protein LSM7.
    
 0.998
AYI70_g5288
DNA topoisomerase 2-associated protein pat1.
   
 0.997
AYI70_g692
U6 snRNA-associated Sm-like protein LSm1.
   
 0.997
AYI70_g6893
Protein LSM14-like protein.
   
 
 0.995
AYI70_g11566
NAD(P)H-hydrate epimerase.
    
 0.991
AYI69_g10638
CCR4-NOT transcription complex subunit 7.
   
 0.991
AYI70_g5455
General negative regulator of transcription subunit 4.
    
 0.990
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.