STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g650260S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family. (196 aa)    
Predicted Functional Partners:
AYI70_g12343
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.998
AYI70_g12096
60S ribosomal protein L35.
  
 0.998
AYI70_g11564
60S ribosomal protein L31.
   
 0.998
AYI70_g10872
60S ribosomal protein L9-A.
  
 0.998
AYI70_g10010
60S ribosomal protein L18.
  
 0.998
AYI70_g1769
60S ribosomal protein L7-B.
  
 0.998
AYI70_g9177
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.998
AYI70_g8527
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.998
AYI69_g6345
60S ribosomal protein L8.
  
 0.998
AYI70_g7839
60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.998
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.