STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g6324Retrovirus-related Pol polyprotein from transposon. (519 aa)    
Predicted Functional Partners:
AYI70_g11110
Transposon Tf2-8 polyprotein.
 
     0.740
AYI70_g7047
Retrovirus-related Pol polyprotein from transposon.
 
     0.725
AYI70_g6037
Retrovirus-related Pol polyprotein from transposon opus.
 
     0.656
AYI70_g3747
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.617
AYI70_g6715
Replication factor A protein 2.
    
 0.542
AYI70_g916
RPA_C domain-containing protein.
    
 0.542
AYI70_g3079
Retrovirus-related Pol polyprotein from transposon.
 
     0.527
AYI70_g3721
DNA-directed RNA polymerase II subunit RPB1.
    
  0.518
AYI70_g12092
Transcription factor IIIA.
    
  0.488
AYI70_g11999
Transcription factor steA.
    
  0.488
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.