STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g6199Putative ABC transporter ATP-binding protein. (611 aa)    
Predicted Functional Partners:
AYI70_g3759
ABC transporter E family member 2.
   
 
 0.907
AYI70_g12096
60S ribosomal protein L35.
   
 
 0.900
AYI70_g7651
40S ribosomal protein S3-1; Belongs to the universal ribosomal protein uS3 family.
   
   0.892
AYI70_g1769
60S ribosomal protein L7-B.
   
 
 0.888
AYI70_g6552
60S ribosomal protein L5.
   
   0.888
AYI70_g5521
Ribosomal protein S16, mitochondrial.
  
   0.886
AYI70_g4153
50S ribosomal protein L19.
   
   0.886
AYI70_g7625
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
   0.881
AYI70_g5555
28S ribosomal protein S6, mitochondrial.
  
   0.877
AYI70_g10105
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.829
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.