STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g5891Fatty acyl-CoA synthetase A. (665 aa)    
Predicted Functional Partners:
AYI70_g2701
Ubiquitin carboxyl-terminal hydrolase 21; Belongs to the peptidase C19 family.
    
 0.712
AYI69_g10355
Ubiquitin-40S ribosomal protein S27a.
    
 0.693
AYI70_g9432
Polyubiquitin.
    
 0.688
AYI70_g12443
Peroxisomal hydratase-dehydrogenase-epimerase.
   
 
 0.669
AYI70_g7056
Peroxisomal multifunctional enzyme type 2.
   
 
 0.669
AYI70_g5573
Peroxisomal hydratase-dehydrogenase-epimerase.
   
 
 0.669
AYI70_g2030
Hydroxysteroid dehydrogenase-like protein 2.
   
 
 0.668
AYI70_g8253
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.666
AYI70_g6039
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.666
AYI70_g5564
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.666
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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