STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g5098Protein SQS1. (617 aa)    
Predicted Functional Partners:
AYI70_g1781
RNA helicase.
    
 0.957
AYI70_g9184
PIN2/TERF1-interacting telomerase inhibitor 1.
    
 
 0.940
AYI70_g12066
Sas10 domain-containing protein.
    
   0.937
AYI70_g12038
U3 small nucleolar ribonucleoprotein IMP3.
    
   0.937
AYI70_g7072
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
   0.937
AYI70_g13
Putative nucleolar complex protein 14.
    
   0.937
AYI70_g7363
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase prp43.
    
 0.933
AYI70_g525
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase.
    
 0.933
AYI70_g9302
RNA helicase.
    
  0.911
AYI70_g4241
RNA helicase.
    
  0.911
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.