STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g4435Uncharacterized protein. (368 aa)    
Predicted Functional Partners:
AYI70_g3249
Structural maintenance of chromosomes protein 5.
   
 0.953
AYI70_g4308
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.945
AYI70_g11855
Non-structural maintenance of chromosomes element 1-like protein.
    
 0.942
AYI70_g2949
Cohesin subunit psc3.
   
 0.890
AYI70_g9320
Uncharacterized protein.
    
 0.888
AYI70_g5602
Uncharacterized protein.
    
 0.888
AYI70_g1346
Condensin complex subunit 1.
   
 0.886
AYI70_g6193
Sister chromatid cohesion protein pds5.
   
 0.858
AYI70_g7956
Cohesin subunit rad21.
   
 0.833
AYI70_g1335
Cohesin subunit rad21.
   
 0.833
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.