STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g4053Uracil catabolism protein 4. (448 aa)    
Predicted Functional Partners:
AYI70_g5243
Uracil-regulated protein 1.
 
  
 0.953
AYI70_g12463
Uracil phosphoribosyltransferase.
   
  
 0.568
AYI70_g5131
Chitinase A1; Belongs to the glycosyl hydrolase 18 family.
   
 
 0.548
AYI70_g6110
Chitinase A1; Belongs to the glycosyl hydrolase 18 family.
   
 
 0.548
AYI70_g604
Chitinase A1; Belongs to the glycosyl hydrolase 18 family.
   
 
 0.548
AYI70_g11611
Uncharacterized protein.
     
 0.536
AYI70_g3845
Uncharacterized protein.
     
 0.536
AYI70_g2889
Cytochrome c oxidase assembly factor 1.
     
 0.514
AYI70_g11766
Ankyrin repeat protein nuc-2.
    
 0.492
AYI70_g9542
Glycerophosphodiester phosphodiesterase gde1.
    
 0.492
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.