STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g3991Beta-chimaerin. (1015 aa)    
Predicted Functional Partners:
AYI70_g294
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
  0.999
AYI70_g6445
Ras-related protein Rac1.
    
 0.996
AYI69_g8157
GTP-binding protein rhoA.
    
 0.996
AYI70_g3453
Cell division control protein 42.
    
 0.996
AYI70_g1581
GTP-binding protein RHO1.
    
 0.996
AYI70_g11769
Uncharacterized protein.
    
 
 0.949
AYI70_g9798
Uncharacterized protein.
    
 
 0.949
AYI70_g3028
Rho guanine nucleotide exchange factor scd1.
    
 
 0.949
AYI70_g11810
Ras-like protein 2.
    
 0.947
AYI70_g9418
Ras-like protein 2.
    
 0.947
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.