STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g3949Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial. (298 aa)    
Predicted Functional Partners:
AYI70_g1331
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B.
 0.998
AYI70_g1688
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial.
 
     0.950
AYI70_g3119
Aspartate-tRNA ligase, cytoplasmic.
  
 0.888
AYI70_g1529
Aspartate-tRNA ligase, mitochondrial.
  
 0.847
AYI70_g1530
Aspartate-tRNA(Asp/Asn) ligase.
  
 0.847
AYI70_g8909
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.835
AYI70_g5116
Putative glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.833
AYI70_g8540
Putative glutamate-tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.804
AYI70_g7864
Putative glutamate-tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.804
AYI70_g2083
Putative asparagine-tRNA ligase, mitochondrial.
   
 0.800
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.