STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g3598Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28. (1084 aa)    
Predicted Functional Partners:
AYI70_g9334
Intersectin-2.
    
  0.999
AYI70_g10609
Pre-mRNA-splicing factor cwc24.
    
 0.998
AYI70_g11725
Pre-mRNA-splicing factor CWC22.
   
 0.997
AYI70_g3782
Splicing factor 3A subunit 1.
   
 0.993
AYI70_g4266
PHD finger-like domain-containing protein 5A.
    
 0.992
AYI70_g2173
Splicing factor 3B subunit 3.
   
 0.992
AYI70_g1007
Splicing factor 3A subunit 3.
   
 0.991
AYI70_g428
Splicing factor 3B subunit 2.
   
 0.991
AYI70_g957
Splicing factor 3B subunit 1.
   
 0.990
AYI70_g180
Pre-mRNA-splicing factor syf1.
   
 0.990
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.