STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g3338Dual-specificity RNA methyltransferase RlmN. (406 aa)    
Predicted Functional Partners:
AYI70_g9334
Intersectin-2.
   
 0.999
AYI70_g8759
Transcription factor prr1.
   
 0.999
AYI70_g1137
Plant intracellular Ras-group-related LRR protein 7.
   
 0.981
AYI70_g9607
RGS domain-containing protein.
   
 0.969
AYI69_g4659
Histone H3; Belongs to the histone H3 family.
   
 0.951
AYI70_g7442
Next to BRCA1 gene 1 protein.
   
 0.943
AYI70_g646
Cofilin; Belongs to the actin-binding proteins ADF family.
   
 0.943
AYI70_g11845
Hsp90 co-chaperone Cdc37.
    
 0.921
AYI70_g10259
E3 ubiquitin-protein ligase COP1.
   
 0.920
AYI70_g11721
E3 ubiquitin-protein ligase COP1.
   
 0.920
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.