STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g3039Uncharacterized protein. (473 aa)    
Predicted Functional Partners:
AYI70_g1902
Putative small nuclear ribonucleoprotein Sm D1.
    
 0.764
AYI70_g12095
DNA polymerase delta small subunit.
    
 0.743
AYI70_g1884
DNA polymerase delta small subunit.
    
 0.743
AYI70_g3711
BRCA1-associated RING domain protein 1.
   
 0.740
AYI70_g11901
DNA polymerase.
   
 0.719
AYI70_g10572
Crossover junction endonuclease mus81.
    
 0.719
AYI70_g4875
Crossover junction endonuclease mus81.
    
 0.719
AYI70_g2999
DNA polymerase.
   
 0.719
AYI69_g5718
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.682
AYI70_g9988
Nucleoporin.
    
 0.667
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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