STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g2800Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (458 aa)    
Predicted Functional Partners:
AYI70_g4755
Ras-related protein RABC1.
   
 0.999
AYI70_g1164
Ras-related protein RABH1d.
   
 0.999
AYI69_g3254
GTP-binding protein ypt1.
   
 0.999
AYI70_g6613
Ras-related protein Rab-5B.
   
 0.983
AYI70_g159
Ras-related protein Rab-5C.
   
 0.983
AYI70_g11819
Ras-related protein Rab-11A.
   
 0.982
AYI70_g3267
Ras-related protein Rab-11A.
   
 0.982
AYI70_g7973
Uncharacterized protein.
   
 0.979
AYI70_g7338
Ras-related protein Rab-8A.
   
 0.979
AYI70_g2505
Ras-related protein Rab-8A.
   
 0.979
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.