STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g2555Uncharacterized protein. (200 aa)    
Predicted Functional Partners:
AYI70_g2500
Hid-1 family protein.
    
 
 0.779
AYI70_g5702
SUN domain-containing protein 2.
    
 
 0.758
AYI70_g5007
Nucleoporin.
    
  0.737
AYI70_g6640
Nucleoprotein TPR.
    
 0.734
AYI70_g2943
Nucleoprotein TPR.
    
 0.734
AYI70_g1560
ATP-dependent RNA helicase glh-4.
    
  0.698
AYI70_g3675
Poly(A)+ RNA export protein.
    
  0.691
AYI70_g3737
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
  0.665
AYI70_g3711
BRCA1-associated RING domain protein 1.
   
 0.641
AYI70_g4532
Putative nucleoporin.
   
 0.597
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.