STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g2044Vesicular inhibitory amino acid transporter. (386 aa)    
Predicted Functional Partners:
AYI70_g3338
Dual-specificity RNA methyltransferase RlmN.
    
 0.788
AYI70_g10259
E3 ubiquitin-protein ligase COP1.
    
 0.768
AYI70_g11721
E3 ubiquitin-protein ligase COP1.
    
 0.768
AYI70_g6908
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 0.766
AYI70_g5268
Peroxisomal NADH pyrophosphatase NUDT12.
    
 0.753
AYI70_g1230
Putative oxidoreductase YteT.
   
  0.713
AYI70_g1392
Ras-related GTP-binding protein A.
   
 0.712
AYI70_g6936
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
 0.692
AYI70_g9432
Polyubiquitin.
   
 0.689
AYI70_g11122
FAS1 domain-containing protein.
    
 0.688
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.