STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g1961Protein sel-1-like protein. (271 aa)    
Predicted Functional Partners:
AYI70_g8010
Protein OS-9-like protein.
   
 0.891
AYI70_g12015
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.748
AYI70_g9401
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.748
AYI70_g5364
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.748
AYI70_g3181
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.740
AYI70_g4654
Spermatogenesis-associated protein 5; Belongs to the AAA ATPase family.
   
 0.740
AYI70_g8289
ERAD-associated E3 ubiquitin-protein ligase HRD1.
    
 0.735
AYI70_g5947
ERAD-associated E3 ubiquitin-protein ligase HRD1.
    
 0.735
AYI70_g4162
E3 ubiquitin-protein ligase synoviolin A.
    
 0.735
AYI70_g9432
Polyubiquitin.
    
  0.644
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.