STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g1781RNA helicase. (811 aa)    
Predicted Functional Partners:
AYI70_g543
U3 small nucleolar RNA-associated protein 14.
   
 0.999
AYI70_g4126
Pre-rRNA-processing protein esf1.
   
 
 0.998
AYI70_g12066
Sas10 domain-containing protein.
   
 0.996
AYI70_g3088
U3 small nucleolar RNA-associated protein 18-like protein.
   
 0.993
AYI70_g106
Pre-rRNA-processing protein ESF2.
   
 
 0.992
AYI70_g9302
RNA helicase.
  
  
0.990
AYI70_g4241
RNA helicase.
  
  
0.990
AYI70_g6160
Nucleolar protein 6.
   
 0.980
AYI70_g5077
Nucleolar protein 6.
   
 0.980
AYI70_g3314
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
   0.980
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.