STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g1718RNase H domain-containing protein. (478 aa)    
Predicted Functional Partners:
AYI70_g5268
Peroxisomal NADH pyrophosphatase NUDT12.
   
  0.720
AYI70_g3262
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.709
AYI70_g607
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
  0.661
AYI69_g5718
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.656
AYI70_g5446
Thymidylate synthase.
    
 0.641
AYI70_g2772
Thymidylate synthase.
    
 0.641
AYI70_g11441
Nucleoside diphosphate kinase.
     
 0.609
AYI70_g10666
Nucleoside diphosphate kinase.
     
 0.609
AYI70_g2645
Flap endonuclease 1.
   
 0.585
AYI70_g4443
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.573
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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