STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g1608Nuclear protein localization protein 4. (594 aa)    
Predicted Functional Partners:
AYI70_g1244
Ubiquitin fusion degradation protein 1.
   
 0.991
AYI70_g3181
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.989
AYI70_g9432
Polyubiquitin.
   
 0.986
AYI69_g10355
Ubiquitin-40S ribosomal protein S27a.
   
 0.981
AYI70_g11012
TRAF-type zinc finger domain-containing protein 1.
   
 0.975
AYI70_g4654
Spermatogenesis-associated protein 5; Belongs to the AAA ATPase family.
   
 0.974
AYI70_g11551
UBX domain-containing protein 2.
    
 0.965
AYI70_g3497
UBX domain-containing protein.
    
 0.965
AYI70_g12015
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 
 0.960
AYI70_g5995
Ubiquitin-60S ribosomal protein L40.
   
 0.959
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.