STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g1319Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family. (399 aa)    
Predicted Functional Partners:
AYI70_g5989
Charged multivesicular body protein 2a.
    
 0.996
AYI70_g2219
Vacuolar-sorting protein SNF7.
    
 0.996
AYI70_g1708
Vacuolar protein-sorting-associated protein 46.
   
 0.989
AYI70_g3862
Uncharacterized protein.
   
 0.988
AYI70_g2873
Charged multivesicular body protein 6.
    
 0.985
AYI70_g2872
Charged multivesicular body protein 6.
    
 0.985
AYI70_g9387
Vta1_C domain-containing protein.
   
 0.978
AYI70_g6617
Uncharacterized protein.
   
 0.978
AYI70_g4902
Uncharacterized protein.
   
 0.978
AYI70_g2501
Charged multivesicular body protein 5.
   
 0.915
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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