STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g1302Putative ATP-dependent RNA helicase DHX33. (776 aa)    
Predicted Functional Partners:
AYI70_g9334
Intersectin-2.
    
  0.999
AYI70_g543
U3 small nucleolar RNA-associated protein 14.
   
 0.973
AYI70_g12066
Sas10 domain-containing protein.
   
 0.972
AYI70_g3088
U3 small nucleolar RNA-associated protein 18-like protein.
   
 0.967
AYI70_g11725
Pre-mRNA-splicing factor CWC22.
   
 0.966
AYI70_g12038
U3 small nucleolar ribonucleoprotein IMP3.
   
  0.964
AYI70_g163
ATP-dependent RNA helicase dbp8.
   
 0.954
AYI70_g13
Putative nucleolar complex protein 14.
 
 
 0.953
AYI70_g5463
U3 small nucleolar RNA-associated protein 5.
   
 0.952
AYI70_g7072
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.944
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.