STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g1013Nucleoporin nup61. (822 aa)    
Predicted Functional Partners:
AYI70_g9988
Nucleoporin.
     
 0.782
AYI70_g7517
Nucleoporin.
     
 0.782
AYI70_g7089
Uncharacterized protein.
     
 0.782
AYI70_g3675
Poly(A)+ RNA export protein.
   
 
  0.704
AYI70_g5898
Uncharacterized protein.
     
 0.634
AYI70_g5817
Nucleoporin.
     
 0.634
AYI70_g4532
Putative nucleoporin.
   
  0.561
AYI70_g4960
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
     
 0.552
AYI70_g2506
Nuclear pore protein.
     
 0.551
AYI70_g2504
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.549
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.