STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g887Signal recognition particle receptor subunit beta. (248 aa)    
Predicted Functional Partners:
AYI70_g11686
Signal recognition particle receptor subunit alpha.
   
 0.988
AYI70_g3219
Signal recognition particle receptor subunit alpha.
   
 0.988
AYI70_g12400
Signal recognition particle SEC65 subunit.
   
 
 0.979
AYI70_g134
Signal recognition particle subunit SRP68.
   
 
 0.968
AYI70_g8671
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 
 0.967
AYI69_g7819
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.908
AYI70_g6552
60S ribosomal protein L5.
    
   0.905
AYI70_g1972
60S ribosomal protein L4-A.
    
 
 0.905
AYI70_g8152
Uncharacterized protein.
    
   0.896
AYI70_g8151
Serine/threonine-protein kinase atr; Belongs to the PI3/PI4-kinase family.
    
   0.896
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.