STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g806Coupling of ubiquitin conjugation to ER degradation protein 1. (180 aa)    
Predicted Functional Partners:
AYI70_g7426
CCR4-NOT transcription complex subunit 3.
    
 0.990
AYI69_g10638
CCR4-NOT transcription complex subunit 7.
   
 0.987
AYI70_g2646
Glucose-repressible alcohol dehydrogenase transcriptional effector.
    
 0.987
AYI70_g5455
General negative regulator of transcription subunit 4.
    
 0.985
AYI70_g2629
Cell differentiation protein RCD1-like protein.
    
 0.979
AYI70_g2630
Cell differentiation protein rcd1.
    
 0.979
AYI70_g10796
Uncharacterized protein.
   
 0.945
AYI70_g6657
Uncharacterized protein.
   
 0.945
AYI70_g4844
CCR4-NOT transcription complex subunit 1.
   
 0.945
AYI70_g1435
Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.930
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.