STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g597Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. (2288 aa)    
Predicted Functional Partners:
AYI70_g4153
50S ribosomal protein L19.
  
 
 0.801
AYI70_g7625
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.793
AYI70_g5555
28S ribosomal protein S6, mitochondrial.
   
 
 0.793
AYI70_g11023
54S ribosomal protein L17, mitochondrial.
   
 
 0.788
AYI70_g5521
Ribosomal protein S16, mitochondrial.
  
 
 0.786
AYI70_g1066
54S ribosomal protein L51, mitochondrial.
   
 
 0.776
AYI70_g11729
Protein argonaute 10.
   
 0.772
AYI70_g9742
Protein argonaute-2.
   
 0.772
AYI70_g7240
Protein argonaute 10.
   
 0.772
AYI70_g4843
Protein argonaute-3; Belongs to the argonaute family.
   
 0.772
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.