STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g525Putative pre-mRNA-splicing factor ATP-dependent RNA helicase. (781 aa)    
Predicted Functional Partners:
AYI70_g9334
Intersectin-2.
    
  0.999
AYI70_g12066
Sas10 domain-containing protein.
   
 0.991
AYI70_g422
U2 small nuclear ribonucleoprotein A.
   
 0.990
AYI70_g11594
Small nuclear ribonucleoprotein-associated protein B.
   
  0.980
AYI70_g1902
Putative small nuclear ribonucleoprotein Sm D1.
   
 0.979
AYI70_g8660
Coiled-coil domain-containing protein 94-like protein.
    
 0.975
AYI70_g11412
SURP and G-patch domain-containing protein 1.
   
 0.975
AYI70_g5990
Nucleolar protein 58.
   
 
 0.965
AYI70_g9184
PIN2/TERF1-interacting telomerase inhibitor 1.
   
 
 0.964
AYI70_g5463
U3 small nucleolar RNA-associated protein 5.
   
 0.962
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.