STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g453Uncharacterized protein. (1329 aa)    
Predicted Functional Partners:
AYI70_g4509
General transcription factor 3C polypeptide 5.
    
 0.977
AYI70_g3153
General transcription factor 3C polypeptide 3.
    
 0.951
AYI70_g2482
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.721
AYI70_g5011
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.702
AYI70_g10938
TATA-box-binding protein.
    
 0.681
AYI70_g389
Chromatin remodeling factor mit1.
   
 0.675
AYI70_g6757
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.668
AYI70_g3711
BRCA1-associated RING domain protein 1.
    
 0.657
AYI70_g6764
30S ribosomal protein S2.
   
  0.644
AYI70_g5521
Ribosomal protein S16, mitochondrial.
   
  0.641
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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