STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g257F-box/kelch-repeat protein SKIP11. (348 aa)    
Predicted Functional Partners:
AYI70_g6579
Cullin-3; Belongs to the cullin family.
    
 0.831
AYI70_g2207
Cullin-1; Belongs to the cullin family.
    
 0.831
AYI70_g6615
E3 ubiquitin-protein ligase RBX1.
    
 0.776
AYI70_g2951
NEDD8-conjugating enzyme ubc12; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.746
AYI70_g2845
Uncharacterized protein.
    
0.678
AYI70_g10763
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
     
 0.673
AYI70_g8471
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
     
 0.673
AYI70_g9002
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
  0.646
AYI70_g3048
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
  0.646
AYI70_g10220
Putative J domain-containing protein.
     
 0.624
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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