STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF83230.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)    
Predicted Functional Partners:
AKF83232.1
Pilus biosynthesis protein PilN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
pilO
Pilus biosynthesis protein PilO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
pilQ
Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
pilM
Pilus assembly protein PilM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
AKF81206.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.909
pilC
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.903
pilB
Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.873
AKF83236.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.750
AKF82460.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
AKF83228.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.721
Your Current Organism:
Myxococcus fulvus 124B02
NCBI taxonomy Id: 1334629
Other names: M. fulvus 124B02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.