Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_12642Pro-resilin. (128 aa)    
Predicted Functional Partners:
Avbf_01274
tRNA-splicing ligase RtcB-like protein.
    
  0.769
Avbf_06054
28S ribosomal protein S9, mitochondrial.
    
  0.740
Avbf_13341
39S ribosomal protein L16, mitochondrial.
    
  0.704
Avbf_03736
28S ribosomal protein S2, mitochondrial.
    
  0.653
Avbf_05579
28S ribosomal protein S29, mitochondrial.
    
  0.651
Avbf_03492
28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
    
  0.651
Avbf_01697
Putative 28S ribosomal protein S16, mitochondrial.
    
  0.651
Avbf_03533
Putative ATP-dependent RNA helicase DHX34.
    
 0.621
Avbf_16101
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.610
Avbf_06630
Protein mago nashi-like protein 2.
    
 0.605
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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