STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_1525160S ribosomal protein L5. (173 aa)    
Predicted Functional Partners:
Avbf_13160
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.998
Avbf_01498
60S ribosomal protein L7.
  
 0.998
Avbf_05739
60S ribosomal protein L11-2; Belongs to the universal ribosomal protein uL5 family.
  
 0.998
Avbf_05430
60S ribosomal protein L9.
  
 0.998
Avbf_06392
60S ribosomal protein L24.
   
 0.997
Avbf_05756
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.997
Avbf_07386
60S ribosomal protein L31.
   
 0.997
Avbf_17159
60S ribosomal protein L8.
  
 0.997
Avbf_06900
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.997
Avbf_08969
60S ribosomal protein L26.
  
 0.997
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.