STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_14574Cystathionine gamma-lyase. (390 aa)    
Predicted Functional Partners:
Avbf_07135
Methionine synthase.
  
 
 0.918
Avbf_14831
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.916
Avbf_00987
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.916
Avbf_07244
Homocysteine S-methyltransferase YbgG.
  
 
 0.915
Avbf_08803
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.910
Avbf_18055
Betaine--homocysteine S-methyltransferase 1.
  
 
 0.902
Avbf_09370
Mevalonate kinase.
 
    
 0.901
Avbf_08648
Adenosylhomocysteinase.
  
 0.898
Avbf_09902
Cysteine dioxygenase.
     
 0.895
Avbf_03928
Putative adenosylhomocysteinase 3.
  
 0.879
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.